STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV10958.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
AFV10959.1
Hypothetical protein.
       0.636
spoVG1
Septation protein; Belongs to the SpoVG family.
       0.620
AFV10956.1
Hypothetical protein.
       0.480
AFV10960.1
Hypothetical protein.
       0.437
AFV10961.1
A24A-like peptidase.
       0.430
AFV10962.1
CpaB-like pilus assembly protein.
       0.430
AFV10963.1
Cobyrinic acid a,c-diamide synthase.
       0.430
AFV10964.1
Type II secretion system protein E.
       0.430
AFV10965.1
Hypothetical protein.
       0.430
AFV10966.1
Hypothetical protein.
       0.430
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.