Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFV11492.1 | gerKA1 | Tph_c12710 | Tph_c08770 | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination protein KA. | 0.715 |
| AFV11492.1 | gerKA2 | Tph_c12710 | Tph_c09060 | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination protein KA. | 0.711 |
| AFV11492.1 | gerKB2 | Tph_c12710 | Tph_c09050 | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination protein KB. | 0.660 |
| AFV11492.1 | gerKC1 | Tph_c12710 | Tph_c08790 | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination protein KC. | 0.687 |
| AFV11492.1 | gerKC3 | Tph_c12710 | Tph_c09040 | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination protein KC. | 0.696 |
| AFV11492.1 | spoIIIAB | Tph_c12710 | Tph_c16450 | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage III sporulation protein AB. | 0.761 |
| AFV11492.1 | spoIIIAE | Tph_c12710 | Tph_c16420 | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage III sporulation protein AE. | 0.777 |
| AFV11492.1 | spoIIM | Tph_c12710 | Tph_c16100 | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage II sporulation protein M. | 0.762 |
| AFV11492.1 | ylbJ | Tph_c12710 | Tph_c10070 | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Sporulation integral membrane protein YlbJ. | 0.789 |
| AFV11492.1 | ypeB | Tph_c12710 | Tph_c22290 | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination YpeB. | 0.737 |
| gerKA1 | AFV11492.1 | Tph_c08770 | Tph_c12710 | Spore germination protein KA. | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.715 |
| gerKA1 | gerKB2 | Tph_c08770 | Tph_c09050 | Spore germination protein KA. | Spore germination protein KB. | 0.804 |
| gerKA1 | gerKC1 | Tph_c08770 | Tph_c08790 | Spore germination protein KA. | Spore germination protein KC. | 0.895 |
| gerKA1 | gerKC3 | Tph_c08770 | Tph_c09040 | Spore germination protein KA. | Spore germination protein KC. | 0.823 |
| gerKA1 | spoIIIAB | Tph_c08770 | Tph_c16450 | Spore germination protein KA. | Stage III sporulation protein AB. | 0.669 |
| gerKA1 | spoIIIAE | Tph_c08770 | Tph_c16420 | Spore germination protein KA. | Stage III sporulation protein AE. | 0.750 |
| gerKA1 | spoIIM | Tph_c08770 | Tph_c16100 | Spore germination protein KA. | Stage II sporulation protein M. | 0.645 |
| gerKA1 | ylbJ | Tph_c08770 | Tph_c10070 | Spore germination protein KA. | Sporulation integral membrane protein YlbJ. | 0.758 |
| gerKA1 | ypeB | Tph_c08770 | Tph_c22290 | Spore germination protein KA. | Spore germination YpeB. | 0.670 |
| gerKA2 | AFV11492.1 | Tph_c09060 | Tph_c12710 | Spore germination protein KA. | spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.711 |
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