STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgAGlycogen synthase GlgA; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (488 aa)    
Predicted Functional Partners:
malQ
4-alpha-glucanotransferase MalQ.
 
 
 0.982
treZ2
Malto-oligosyltrehalose trehalohydrolase TreZ; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.977
treZ1
Malto-oligosyltrehalose trehalohydrolase TreZ.
  
 0.928
AFV11145.1
Glycoside hydrolase/deacetylase; Belongs to the glycosyl hydrolase 57 family.
  
 
 0.912
treT
Trehalose glycosyltransferring synthase TreT.
     
 0.903
galT
Galactose-1-phosphate uridylyltransferase GalT.
  
  
 0.827
manC2
Mannose-1-phosphate guanylyltransferase ManC.
 
    
 0.725
glmM1
Phosphoglucosamine mutase GlmM.
  
  
 0.655
pgi
Glucose-6-phosphate isomerase Pgi; Belongs to the GPI family.
  
  
 0.550
aldA
Aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family.
  
  
 0.511
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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