Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFV11881.1 | fliN | Tph_c16780 | Tph_c10950 | RNA polymerase sigma factor, sigma-70 family. | Flagellar motor switch protein FliN. | 0.716 |
| AFV11881.1 | rpoB | Tph_c16780 | Tph_c25930 | RNA polymerase sigma factor, sigma-70 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.690 |
| AFV11881.1 | rpoD2 | Tph_c16780 | Tph_c16830 | RNA polymerase sigma factor, sigma-70 family. | DNA-directed RNA polymerase sigma 70 subunit RpoD. | 0.959 |
| AFV11881.1 | spoIIAB | Tph_c16780 | Tph_c16030 | RNA polymerase sigma factor, sigma-70 family. | spoIIAB: anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.743 |
| AFV11881.1 | spoIIE | Tph_c16780 | Tph_c26830 | RNA polymerase sigma factor, sigma-70 family. | Stage II sporulation protein E. | 0.639 |
| AFV11881.1 | spoIVA | Tph_c16780 | Tph_c15570 | RNA polymerase sigma factor, sigma-70 family. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.724 |
| AFV11881.1 | spoVAC | Tph_c16780 | Tph_c16000 | RNA polymerase sigma factor, sigma-70 family. | Stage V sporulation protein AC. | 0.667 |
| AFV11881.1 | spoVAD | Tph_c16780 | Tph_c15990 | RNA polymerase sigma factor, sigma-70 family. | Stage V sporulation protein AD. | 0.696 |
| fliN | AFV11881.1 | Tph_c10950 | Tph_c16780 | Flagellar motor switch protein FliN. | RNA polymerase sigma factor, sigma-70 family. | 0.716 |
| fliN | rpoD2 | Tph_c10950 | Tph_c16830 | Flagellar motor switch protein FliN. | DNA-directed RNA polymerase sigma 70 subunit RpoD. | 0.716 |
| fliN | sigG2 | Tph_c10950 | Tph_c16020 | Flagellar motor switch protein FliN. | Sporulation sigma-G factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.716 |
| fliN | spoIIAB | Tph_c10950 | Tph_c16030 | Flagellar motor switch protein FliN. | spoIIAB: anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.519 |
| rpoB | AFV11881.1 | Tph_c25930 | Tph_c16780 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma factor, sigma-70 family. | 0.690 |
| rpoB | rpoD2 | Tph_c25930 | Tph_c16830 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase sigma 70 subunit RpoD. | 0.690 |
| rpoB | sigG2 | Tph_c25930 | Tph_c16020 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Sporulation sigma-G factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.768 |
| rpoD2 | AFV11881.1 | Tph_c16830 | Tph_c16780 | DNA-directed RNA polymerase sigma 70 subunit RpoD. | RNA polymerase sigma factor, sigma-70 family. | 0.959 |
| rpoD2 | fliN | Tph_c16830 | Tph_c10950 | DNA-directed RNA polymerase sigma 70 subunit RpoD. | Flagellar motor switch protein FliN. | 0.716 |
| rpoD2 | rpoB | Tph_c16830 | Tph_c25930 | DNA-directed RNA polymerase sigma 70 subunit RpoD. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.690 |
| rpoD2 | sigG1 | Tph_c16830 | Tph_c12730 | DNA-directed RNA polymerase sigma 70 subunit RpoD. | Sporulation-specific RNA polymerase sigma-G factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.743 |
| rpoD2 | sigG2 | Tph_c16830 | Tph_c16020 | DNA-directed RNA polymerase sigma 70 subunit RpoD. | Sporulation sigma-G factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.729 |
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