STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppC1D,D-dipeptide ABC transport system permease protein DppC. (296 aa)    
Predicted Functional Partners:
dppD
D,D-dipeptide ABC transport system ATP-binding protein DppD; Belongs to the ABC transporter superfamily.
  
 0.995
dppF
D,D-dipeptide ABC transport system ATP-binding protein DppF; Belongs to the ABC transporter superfamily.
  
 0.993
AFV10602.1
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.980
oppD2
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
  
 0.979
AFV10603.1
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    0.975
oppD1
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
    0.972
appF
Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
  
 0.971
ddpB
D,D-dipeptide ABC transport system permease protein DdpB.
  
 0.968
oppF
Oligopeptide transport ATP-binding protein OppF.
  
 0.965
gsiA
Glutathione ABC transport system ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
 0.942
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.