STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bchI1Magnesium chelatase 38 kDa subunit BchI. (407 aa)    
Predicted Functional Partners:
bchD
Magnesium chelatase 67 kDa subunit BchD.
 
 0.999
AFV10587.1
Hypothetical protein.
 
 0.992
AFV10586.1
Putative magnesium chelatase.
  
  
 
0.928
cobN
Cobalt insertion protein CobN.
 
  
 0.919
bchI2
Magnesium-chelatase BchI.
  
  
 
0.900
AFV12687.1
Putative magnesium chelatase.
 
  
 0.823
cysG
Siroheme synthase CysG.
     
 0.687
AFV11263.1
Mg chelatase subunit ChlI.
      
 0.681
bchP
Digeranylgeranylglycerophospholipid reductase BchP.
  
  
 0.639
cobT1
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
  
 0.550
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.