STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV12090.1Hypothetical protein; AMP-forming. (328 aa)    
Predicted Functional Partners:
AFV11900.1
AAA ATPase.
  
     0.658
AFV11902.1
Serine/threonine protein kinase.
  
     0.651
AFV12192.1
Hypothetical protein.
  
     0.626
AFV11898.1
Hypothetical protein.
  
     0.623
cisA2
DNA recombinase CisA.
  
     0.580
AFV11904.1
Hypothetical protein.
  
     0.578
AFV11578.1
Transposase IS111A/IS1328/IS1533 family.
  
     0.554
AFV12089.1
Hypothetical protein.
       0.543
AFV10548.1
Transposase.
  
     0.539
AFV10585.1
Transposase.
  
     0.523
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.