STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mttC14Trimethylamine corrinoid protein 1. (210 aa)    
Predicted Functional Partners:
metH1
Methionine synthase MetH.
 
 
  0.997
metH2
Methionine synthase MetH.
 
 
  0.997
metH3
Methionine synthase MetH.
 
    0.972
AFV10429.1
Methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase.
 
    0.971
acsE
Methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase AcsE.
 
    0.959
mttC13
Trimethylamine corrinoid protein 1.
  
  
 
0.902
mtbC11
Dimethylamine corrinoid protein 1.
  
  
 
0.902
metF
5,10-methylenetetrahydrofolate reductase; NADPH; Belongs to the methylenetetrahydrofolate reductase family.
  
 
  0.901
thyX
Thymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
     
  0.900
fhs1
Formate--tetrahydrofolate ligase Fhs; Belongs to the formate--tetrahydrofolate ligase family.
     
  0.900
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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