STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV12224.1Trimethylamine methyltransferase. (483 aa)    
Predicted Functional Partners:
mtaB
Methanol-cobalamin methyltransferase, subunit beta.
     
  0.900
mtbB2
Dimethylamine methyltransferase MtbB.
     
  0.900
mttC
Trimethylamine corrinoid protein MttC.
 
   
  0.800
AFV12225.1
Trimethylamine methyltransferase.
 
    
0.786
AFV10895.1
Hydantoinase/oxoprolinase.
  
     0.728
AFV12652.1
Putative ferredoxin.
 
     0.610
mttC14
Trimethylamine corrinoid protein 1.
      0.590
AFV12219.1
Methylaspartate ammonia-lyase.
       0.452
glmE
Methylaspartate mutase subunit E; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
       0.452
mutL2
Protein MutL.
       0.452
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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