STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV12273.1Glucose-1-phosphate thymidylyl transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (446 aa)    
Predicted Functional Partners:
ino
Inositol-3-phosphate synthase Ino.
  
 0.996
cinA
Competence-damage inducible protein CinA; Belongs to the CinA family.
  
  
 0.904
hisK
Histidinol-phosphatase HisK; Belongs to the PHP hydrolase family. HisK subfamily.
  
    0.775
AFV11374.1
Transcriptional regulator XRE family.
  
    0.731
icaA
poly-beta-1,6-N-acetyl-D-glucosamine synthase IcaA.
  
  
 0.612
flgK
Flagellar hook protein 1.
  
    0.587
AFV12271.1
5'-nucleotidase/apyrase-like protein.
  
    0.547
cysK1
Cysteine synthase A.
       0.543
fmt
methionyl-tRNA formyltransferase Fmt; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.490
lytF
Endopeptidase LytF.
 
     0.486
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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