STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV12329.1Putative ech hydrogenase subunit B. (286 aa)    
Predicted Functional Partners:
AFV12327.1
Putative ech hydrogenase subunit D.
 
 0.999
AFV12328.1
Putative ech hydrogenase subunit C.
 
 0.999
AFV12330.1
Putative ech hydrogenase subunit A.
 
 0.999
nuoF5
NADH-quinone oxidoreductase 51 kDa subunit F.
  
 0.996
AFV12325.1
Putative ech hydrogenase subunit F.
 
 0.993
nuoF2
NADH-quinone oxidoreductase 51 kDa subunit F.
  
 0.977
nuoF4
NADH-quinone oxidoreductase 51 kDa subunit F.
  
 0.976
nuoF6
NADH-quinone oxidoreductase 51 kDa subunit F.
  
 0.976
nuoG2
NADH-quinone oxidoreductase subunit G 2.
  
 0.974
hyfH
Formate hydrogenlyase complex iron-sulfur protein HyfH.
 
 0.964
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.