Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFV12487.1 | AFV12488.1 | Tph_c22970 | Tph_c22980 | Resolvase. | Recombinase. | 0.940 |
AFV12487.1 | AFV12489.1 | Tph_c22970 | Tph_c22990 | Resolvase. | Recombinase. | 0.810 |
AFV12487.1 | AFV12490.1 | Tph_c22970 | Tph_c23000 | Resolvase. | Hypothetical protein. | 0.596 |
AFV12487.1 | AFV12491.1 | Tph_c22970 | Tph_c23010 | Resolvase. | N-acetylmuramoyl-L-alanine amidase. | 0.480 |
AFV12487.1 | AFV12492.1 | Tph_c22970 | Tph_c23020 | Resolvase. | Toxin secretion/phage lysis holin. | 0.715 |
AFV12487.1 | AFV12504.1 | Tph_c22970 | Tph_c23140 | Resolvase. | Phage major capsid protein, HK97 family. | 0.507 |
AFV12487.1 | AFV12514.1 | Tph_c22970 | Tph_c23240 | Resolvase. | Putative virulence protein. | 0.503 |
AFV12487.1 | AFV12515.1 | Tph_c22970 | Tph_c23250 | Resolvase. | DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.485 |
AFV12487.1 | AFV12518.1 | Tph_c22970 | Tph_c23280 | Resolvase. | Putative bacteriophage protein, phi-105-like protein. | 0.483 |
AFV12487.1 | AFV12526.1 | Tph_c22970 | Tph_c23360 | Resolvase. | Recombinase. | 0.763 |
AFV12488.1 | AFV12487.1 | Tph_c22980 | Tph_c22970 | Recombinase. | Resolvase. | 0.940 |
AFV12488.1 | AFV12489.1 | Tph_c22980 | Tph_c22990 | Recombinase. | Recombinase. | 0.945 |
AFV12488.1 | AFV12490.1 | Tph_c22980 | Tph_c23000 | Recombinase. | Hypothetical protein. | 0.643 |
AFV12488.1 | AFV12491.1 | Tph_c22980 | Tph_c23010 | Recombinase. | N-acetylmuramoyl-L-alanine amidase. | 0.875 |
AFV12488.1 | AFV12492.1 | Tph_c22980 | Tph_c23020 | Recombinase. | Toxin secretion/phage lysis holin. | 0.509 |
AFV12488.1 | AFV12514.1 | Tph_c22980 | Tph_c23240 | Recombinase. | Putative virulence protein. | 0.721 |
AFV12489.1 | AFV12487.1 | Tph_c22990 | Tph_c22970 | Recombinase. | Resolvase. | 0.810 |
AFV12489.1 | AFV12488.1 | Tph_c22990 | Tph_c22980 | Recombinase. | Recombinase. | 0.945 |
AFV12489.1 | AFV12490.1 | Tph_c22990 | Tph_c23000 | Recombinase. | Hypothetical protein. | 0.596 |
AFV12489.1 | AFV12491.1 | Tph_c22990 | Tph_c23010 | Recombinase. | N-acetylmuramoyl-L-alanine amidase. | 0.646 |
page 1 of 4