STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV12515.1DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. (417 aa)    
Predicted Functional Partners:
AFV12518.1
Putative bacteriophage protein, phi-105-like protein.
 
    0.957
AFV12514.1
Putative virulence protein.
 
  
 0.903
AFV12508.1
Phage terminase.
 
   
 0.886
AFV12516.1
DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
0.845
AFV12512.1
Hypothetical protein.
 
    0.842
AFV12506.1
Phage portal protein, HK97 family.
 
  
 0.807
AFV12504.1
Phage major capsid protein, HK97 family.
 
    0.798
AFV12517.1
Hypothetical protein.
       0.788
clpP2
Peptidase S14 ClpP; Belongs to the peptidase S14 family.
 
   
 0.782
AFV12492.1
Toxin secretion/phage lysis holin.
 
    0.710
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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