STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
korA22-oxoglutarate synthase KorA. (368 aa)    
Predicted Functional Partners:
vorA2
Ketoisovalerate oxidoreductase VorA.
 0.999
oorC
2-oxoacid:ferredoxin oxidoreductase, gamma subunit OorC.
 
 0.998
vorA1
Ketoisovalerate oxidoreductase subunit VorA.
 0.997
AFV13052.1
Hypothetical protein.
 
  
  0.993
porG
Pyruvate:ferredoxin oxidoreductase PorG, gamma subunit PorG.
 
 0.992
AFV11968.1
4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 0.979
AFV12571.1
Hypothetical protein.
  
  
  0.973
pyk
Pyruvate kinase Pyk; Belongs to the pyruvate kinase family.
     
 0.933
AFV11843.1
accB acetyl-CoA carboxylase, biotin carboxyl carrier protein.
    
 0.933
pflB
Formate acetyltransferase PflB.
     
 0.928
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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