STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJ183_12350Unannotated protein; Belongs to the peptidase S1C family. (460 aa)    
Predicted Functional Partners:
CJ183_04290
Unannotated protein.
  
  
 0.722
lepB
Unannotated protein; Belongs to the peptidase S26 family.
 
   
 0.610
CJ183_00630
Unannotated protein.
 
 0.578
CJ183_12830
Unannotated protein.
 
  
 0.536
glpK
Unannotated protein.
   
 0.518
CJ183_19245
Unannotated protein.
     
 0.498
CJ183_19215
Unannotated protein.
   
 
 0.482
CJ183_19200
Unannotated protein.
  
   0.475
C5B41_00930
Unannotated protein; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.467
C5B41_00945
Unannotated protein.
  
    0.464
Your Current Organism:
Acinetobacter ursingii
NCBI taxonomy Id: 108980
Other names: A. ursingii, Acinetobacter phenon 1, Acinetobacter sp. phenon 1, Acinetobacter ursingii Nemec et al. 2001, CCUG 45559, CIP 107286, CNCTC 6735, DSM 16037, LMG 19575, LMG:19575, LUH 3792, NIPH 137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.