Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C5B41_14685 | CJ183_02875 | GCA_000934145_00559 | GCA_000934145_00561 | Unannotated protein. | Unannotated protein. | 0.814 |
C5B41_14685 | CJ183_02880 | GCA_000934145_00559 | GCA_000934145_00560 | Unannotated protein. | Unannotated protein. | 0.755 |
C5B41_14685 | CJ183_16845 | GCA_000934145_00559 | GCA_000934145_02861 | Unannotated protein. | Unannotated protein. | 0.415 |
C5B41_14685 | CJ183_16855 | GCA_000934145_00559 | GCA_000934145_02860 | Unannotated protein. | Unannotated protein. | 0.679 |
C5B41_14685 | rph | GCA_000934145_00559 | GCA_000934145_00562 | Unannotated protein. | Unannotated protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.400 |
CJ183_02875 | C5B41_14685 | GCA_000934145_00561 | GCA_000934145_00559 | Unannotated protein. | Unannotated protein. | 0.814 |
CJ183_02875 | CJ183_02880 | GCA_000934145_00561 | GCA_000934145_00560 | Unannotated protein. | Unannotated protein. | 0.995 |
CJ183_02875 | CJ183_13720 | GCA_000934145_00561 | GCA_000934145_02244 | Unannotated protein. | Unannotated protein. | 0.927 |
CJ183_02875 | CJ183_16845 | GCA_000934145_00561 | GCA_000934145_02861 | Unannotated protein. | Unannotated protein. | 0.984 |
CJ183_02875 | CJ183_16855 | GCA_000934145_00561 | GCA_000934145_02860 | Unannotated protein. | Unannotated protein. | 0.903 |
CJ183_02875 | rph | GCA_000934145_00561 | GCA_000934145_00562 | Unannotated protein. | Unannotated protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.725 |
CJ183_02880 | C5B41_14685 | GCA_000934145_00560 | GCA_000934145_00559 | Unannotated protein. | Unannotated protein. | 0.755 |
CJ183_02880 | CJ183_02875 | GCA_000934145_00560 | GCA_000934145_00561 | Unannotated protein. | Unannotated protein. | 0.995 |
CJ183_02880 | CJ183_05200 | GCA_000934145_00560 | GCA_000934145_02201 | Unannotated protein. | Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family. | 0.977 |
CJ183_02880 | CJ183_12050 | GCA_000934145_00560 | GCA_000934145_01000 | Unannotated protein. | Unannotated protein. | 0.678 |
CJ183_02880 | CJ183_13720 | GCA_000934145_00560 | GCA_000934145_02244 | Unannotated protein. | Unannotated protein. | 0.909 |
CJ183_02880 | CJ183_16845 | GCA_000934145_00560 | GCA_000934145_02861 | Unannotated protein. | Unannotated protein. | 0.926 |
CJ183_02880 | CJ183_16855 | GCA_000934145_00560 | GCA_000934145_02860 | Unannotated protein. | Unannotated protein. | 0.982 |
CJ183_02880 | fadH | GCA_000934145_00560 | GCA_000934145_02144 | Unannotated protein. | Unannotated protein. | 0.660 |
CJ183_02880 | nfuA | GCA_000934145_00560 | GCA_000934145_01071 | Unannotated protein. | Unannotated protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.684 |
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