STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgaCUnannotated protein. (420 aa)    
Predicted Functional Partners:
pgaB
Unannotated protein.
 
  
 0.966
CJ183_00430
Unannotated protein.
 
  
 0.865
CJ183_00415
Unannotated protein.
 
   
 0.805
CJ183_16525
Unannotated protein.
       0.725
CJ183_00630
Unannotated protein.
  
 
 0.646
CJ183_21355
Unannotated protein.
  
  
 0.558
CJ183_04290
Unannotated protein.
  
 
 0.510
CJ183_02800
Unannotated protein.
 
  
 0.506
GCA_000934145_01879
Unannotated protein.
 
  
 0.495
CJ183_10695
Unannotated protein.
  
  
 0.486
Your Current Organism:
Acinetobacter ursingii
NCBI taxonomy Id: 108980
Other names: A. ursingii, Acinetobacter phenon 1, Acinetobacter sp. phenon 1, Acinetobacter ursingii Nemec et al. 2001, CCUG 45559, CIP 107286, CNCTC 6735, DSM 16037, LMG 19575, LMG:19575, LUH 3792, NIPH 137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.