Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ183_01120 | CJ183_01125 | GCA_000934145_01164 | GCA_000934145_01163 | Unannotated protein. | Unannotated protein. | 0.752 |
CJ183_01120 | CJ183_01135 | GCA_000934145_01164 | GCA_000934145_01161 | Unannotated protein. | Unannotated protein. | 0.644 |
CJ183_01120 | lolD | GCA_000934145_01164 | GCA_000934145_01162 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.753 |
CJ183_01125 | CJ183_01120 | GCA_000934145_01163 | GCA_000934145_01164 | Unannotated protein. | Unannotated protein. | 0.752 |
CJ183_01125 | CJ183_01135 | GCA_000934145_01163 | GCA_000934145_01161 | Unannotated protein. | Unannotated protein. | 0.710 |
CJ183_01125 | CJ183_10755 | GCA_000934145_01163 | GCA_000934145_00921 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family. | 0.961 |
CJ183_01125 | lolA | GCA_000934145_01163 | GCA_000934145_01128 | Unannotated protein. | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.921 |
CJ183_01125 | lolD | GCA_000934145_01163 | GCA_000934145_01162 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.998 |
CJ183_01135 | CJ183_01120 | GCA_000934145_01161 | GCA_000934145_01164 | Unannotated protein. | Unannotated protein. | 0.644 |
CJ183_01135 | CJ183_01125 | GCA_000934145_01161 | GCA_000934145_01163 | Unannotated protein. | Unannotated protein. | 0.710 |
CJ183_01135 | CJ183_10755 | GCA_000934145_01161 | GCA_000934145_00921 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family. | 0.454 |
CJ183_01135 | lolD | GCA_000934145_01161 | GCA_000934145_01162 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.710 |
CJ183_10755 | CJ183_01125 | GCA_000934145_00921 | GCA_000934145_01163 | Unannotated protein; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family. | Unannotated protein. | 0.961 |
CJ183_10755 | CJ183_01135 | GCA_000934145_00921 | GCA_000934145_01161 | Unannotated protein; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family. | Unannotated protein. | 0.454 |
CJ183_10755 | lolA | GCA_000934145_00921 | GCA_000934145_01128 | Unannotated protein; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family. | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.643 |
CJ183_10755 | lolD | GCA_000934145_00921 | GCA_000934145_01162 | Unannotated protein; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family. | Unannotated protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.729 |
CJ183_10755 | rsmA | GCA_000934145_00921 | GCA_000934145_01694 | Unannotated protein; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.567 |
CJ183_13470 | CJ183_15025 | GCA_000934145_02794 | GCA_000934145_01927 | Unannotated protein. | Unannotated protein. | 0.657 |
CJ183_13470 | lolD | GCA_000934145_02794 | GCA_000934145_01162 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.710 |
CJ183_13470 | rpsE | GCA_000934145_02794 | GCA_000934145_00770 | Unannotated protein. | Unannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.483 |
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