STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5B41_10170Unannotated protein. (212 aa)    
Predicted Functional Partners:
C5B41_10165
Unannotated protein.
 
 
 0.981
kdsB
Unannotated protein; Belongs to the KdsB family.
 
    0.933
lpxK
Unannotated protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
     0.929
CJ183_07230
Unannotated protein.
 
     0.883
C5B41_10140
Unannotated protein.
 
     0.861
CJ183_07245
Unannotated protein.
       0.844
CJ183_07255
Unannotated protein.
       0.813
GCA_000934145_02960
Unannotated protein.
 
 
 0.804
CJ183_14465
Unannotated protein.
 
 
 0.802
C5B41_10180
Unannotated protein.
  
    0.789
Your Current Organism:
Acinetobacter ursingii
NCBI taxonomy Id: 108980
Other names: A. ursingii, Acinetobacter phenon 1, Acinetobacter sp. phenon 1, Acinetobacter ursingii Nemec et al. 2001, CCUG 45559, CIP 107286, CNCTC 6735, DSM 16037, LMG 19575, LMG:19575, LUH 3792, NIPH 137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.