STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5B41_08345Unannotated protein. (144 aa)    
Predicted Functional Partners:
GCA_000934145_01816
Unannotated protein.
 
 
 0.978
CJ183_03270
Unannotated protein.
 
 
 0.975
CJ183_03275
Unannotated protein.
 
  
 0.971
C5B41_08355
Unannotated protein.
 
    0.968
CJ183_03305
Unannotated protein.
 
    0.968
CJ183_03320
Unannotated protein.
 
    0.968
CJ183_03260
Unannotated protein.
 
   
 0.967
GCA_000934145_01817
Unannotated protein.
 
     0.967
CJ183_03265
Unannotated protein.
 
     0.966
C5B41_08360
Unannotated protein.
 
    0.965
Your Current Organism:
Acinetobacter ursingii
NCBI taxonomy Id: 108980
Other names: A. ursingii, Acinetobacter phenon 1, Acinetobacter sp. phenon 1, Acinetobacter ursingii Nemec et al. 2001, CCUG 45559, CIP 107286, CNCTC 6735, DSM 16037, LMG 19575, LMG:19575, LUH 3792, NIPH 137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.