Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ183_04290 | CJ183_15065 | GCA_000934145_01340 | GCA_000934145_01933 | Unannotated protein. | Unannotated protein. | 0.469 |
CJ183_04290 | ppk1 | GCA_000934145_01340 | GCA_000934145_01061 | Unannotated protein. | Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). | 0.436 |
CJ183_04290 | proC | GCA_000934145_01340 | GCA_000934145_01936 | Unannotated protein. | Unannotated protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.500 |
CJ183_04290 | rho | GCA_000934145_01340 | GCA_000934145_01931 | Unannotated protein. | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.466 |
CJ183_04290 | tilS | GCA_000934145_01340 | GCA_000934145_01935 | Unannotated protein. | Unannotated protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.438 |
CJ183_04290 | trxA | GCA_000934145_01340 | GCA_000934145_01932 | Unannotated protein. | Unannotated protein; Belongs to the thioredoxin family. | 0.404 |
CJ183_04930 | CJ183_13730 | GCA_000934145_00659 | GCA_000934145_02245 | Unannotated protein. | Unannotated protein. | 0.928 |
CJ183_04930 | CJ183_15065 | GCA_000934145_00659 | GCA_000934145_01933 | Unannotated protein. | Unannotated protein. | 0.913 |
CJ183_10975 | CJ183_15065 | GCA_000934145_00979 | GCA_000934145_01933 | Unannotated protein. | Unannotated protein. | 0.672 |
CJ183_10975 | ppk1 | GCA_000934145_00979 | GCA_000934145_01061 | Unannotated protein. | Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). | 0.943 |
CJ183_13730 | CJ183_04930 | GCA_000934145_02245 | GCA_000934145_00659 | Unannotated protein. | Unannotated protein. | 0.928 |
CJ183_13730 | CJ183_15065 | GCA_000934145_02245 | GCA_000934145_01933 | Unannotated protein. | Unannotated protein. | 0.923 |
CJ183_15065 | CJ183_04290 | GCA_000934145_01933 | GCA_000934145_01340 | Unannotated protein. | Unannotated protein. | 0.469 |
CJ183_15065 | CJ183_04930 | GCA_000934145_01933 | GCA_000934145_00659 | Unannotated protein. | Unannotated protein. | 0.913 |
CJ183_15065 | CJ183_10975 | GCA_000934145_01933 | GCA_000934145_00979 | Unannotated protein. | Unannotated protein. | 0.672 |
CJ183_15065 | CJ183_13730 | GCA_000934145_01933 | GCA_000934145_02245 | Unannotated protein. | Unannotated protein. | 0.923 |
CJ183_15065 | accA | GCA_000934145_01933 | GCA_000934145_01934 | Unannotated protein. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.583 |
CJ183_15065 | ppk1 | GCA_000934145_01933 | GCA_000934145_01061 | Unannotated protein. | Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). | 0.954 |
CJ183_15065 | proC | GCA_000934145_01933 | GCA_000934145_01936 | Unannotated protein. | Unannotated protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.684 |
CJ183_15065 | rho | GCA_000934145_01933 | GCA_000934145_01931 | Unannotated protein. | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.572 |
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