STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934145_02965Unannotated protein. (323 aa)    
Predicted Functional Partners:
CJ183_15350
Unannotated protein.
 
 
 0.955
CJ183_08675
Unannotated protein.
  
 
 0.954
CJ183_08550
Unannotated protein.
  
 
 0.937
CJ183_10500
Unannotated protein.
       0.777
GCA_000934145_02964
Unannotated protein.
       0.719
CJ183_02665
Unannotated protein; Belongs to the GPI family.
   
 
 0.668
CJ183_10495
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
       0.646
GCA_000934145_02968
Unannotated protein.
       0.646
CJ183_10490
Unannotated protein.
       0.646
mdh
Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
 
 0.534
Your Current Organism:
Acinetobacter ursingii
NCBI taxonomy Id: 108980
Other names: A. ursingii, Acinetobacter phenon 1, Acinetobacter sp. phenon 1, Acinetobacter ursingii Nemec et al. 2001, CCUG 45559, CIP 107286, CNCTC 6735, DSM 16037, LMG 19575, LMG:19575, LUH 3792, NIPH 137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.