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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX62451.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
APX62452.1
Transglutaminase-like protein.
 
  
 0.976
APX62450.1
Protein involved in ATP binding and ATPase activity.
 
  
 0.956
APX63951.1
Pilus assembly protein PilP.
 
     0.752
APX63953.1
Fimbrial assembly protein PilN.
 
     0.738
APX64062.1
Peptidoglycan-binding lysin domain-containing protein; Protein involved in cell wall macromolecule catabolic process.
 
     0.737
APX63117.1
Pilus assembly PilZ domain-containing protein; Protein involved in cyclic-di-GMP binding.
 
     0.728
APX63952.1
Pilus assembly protein PilO.
 
     0.722
APX63954.1
Type IV pilus assembly protein PilM.
 
     0.684
APX63617.1
Type II secretion system protein; Protein involved in protein transporter activity and protein secretion by the type II secretion system.
  
     0.646
APX63929.1
Type IV pilus modification protein PilV.
  
     0.599
Your Current Organism:
Acinetobacter schindleri
NCBI taxonomy Id: 108981
Other names: A. schindleri, Acinetobacter phenon 2, Acinetobacter schindleri Nemec et al. 2001, Acinetobacter sp. phenon 2, CCUG 45560, CIP 107287, CNCTC 6736, DSM 16038, LMG 19576, LMG:19576, LUH 5832
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.