STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO28695.1Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (241 aa)    
Predicted Functional Partners:
SDO28662.1
Polar amino acid transport system permease protein.
  0.993
SDO92693.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.992
SDO17270.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.986
SDO53312.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.985
SDP12212.1
Glutamate transport system permease protein.
  0.985
SDO28627.1
Polar amino acid transport system ATP-binding protein.
  0.965
SDP12245.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.961
SDO53347.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.927
SDO53831.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.927
SDP12323.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.927
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.