STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO54922.1Dehydrogenase (flavoprotein). (337 aa)    
Predicted Functional Partners:
SDO54892.1
Alkylresorcinol O-methyltransferase.
 
  
 0.965
SDO54859.1
Isopalmitoylresorcinol synthase.
 
  
 0.964
SDO25841.1
Electron transfer flavoprotein beta subunit.
  
 
 0.881
SDO54646.1
4-hydroxybenzoate polyprenyltransferase.
 
 
 0.872
SDO25818.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.788
SDO97589.1
Putative zinc-finger.
   
    0.543
SDP24014.1
Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family.
 
 0.514
SDO79718.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
   
 0.492
SDP17764.1
Phytoene dehydrogenase-related protein.
 
 
 0.492
SDO25964.1
Phytoene dehydrogenase-related protein.
 
 
 0.483
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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