STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO73108.1DNA-binding transcriptional regulator, PadR family. (190 aa)    
Predicted Functional Partners:
SDO73082.1
Myo-inositol-1-phosphate synthase.
 
   
 0.857
SDO72717.1
Major Facilitator Superfamily protein.
 
   
 0.645
SDO73138.1
Hypothetical protein.
       0.625
SDO73183.1
Uncharacterized membrane protein.
       0.523
SDO73161.1
Oligo-1,6-glucosidase.
       0.512
SDO39914.1
Hypothetical protein.
  
  
 0.424
SDP05070.1
Zinicin-like metallopeptidase.
  
     0.422
SDO26871.1
Hypothetical protein.
  
     0.409
SDO62799.1
Acetyltransferase (GNAT) family protein.
  
    0.407
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.