STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO74208.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (315 aa)    
Predicted Functional Partners:
SDO74186.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.982
SDO74237.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.982
SDO41901.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.973
SDO57491.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.922
SDO67857.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.921
SDP20261.1
Raffinose/stachyose/melibiose transport system permease protein.
 0.919
SDO74078.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.915
SDO51480.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.907
SDO45114.1
Multiple sugar transport system permease protein.
 0.906
SDO87877.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.901
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.