STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO78018.1Acyl-[acyl-carrier-protein] desaturase. (344 aa)    
Predicted Functional Partners:
SDP12829.1
Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
 0.996
SDO44262.1
Putative TIM-barrel protein, nifR3 family.
  
  
 0.886
SDO20121.1
Fatty acid desaturase.
     
 0.861
SDO88401.1
Ferredoxin-NADP reductase.
  
 
 0.847
SDP44295.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
   
 
 0.837
SDO61651.1
NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family.
     
 0.785
SDO70177.1
MOSC domain-containing protein YiiM.
  
 
 0.770
SDO85627.1
Propane monooxygenase reductase subunit.
  
 
 0.770
SDO91796.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.770
SDO78074.1
Dynamin family protein.
       0.610
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.