STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO80851.1MT0933-like antitoxin protein. (64 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.798
SDO74104.1
acyl-CoA thioesterase-1.
  
 0.791
SDO26820.1
Lysophospholipase L1.
   
 0.768
SDO30394.1
Lysophospholipase L1.
   
 0.768
SDP45249.1
Lysophospholipase L1.
   
 0.768
SDO39461.1
Hypothetical protein.
  
 
 0.594
SDP04227.1
Cysteine-rich secretory protein family protein.
  
    0.593
SDO80897.1
Hypothetical protein.
       0.574
SDO73552.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
  
 0.535
SDO73747.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
  
 0.535
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.