STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO85289.1Glycine betaine/proline transport system ATP-binding protein. (351 aa)    
Predicted Functional Partners:
SDO85220.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.999
SDO85256.1
Glycine betaine/proline transport system permease protein.
 0.999
SDO18037.1
ATP-binding cassette, subfamily B.
 
     
0.899
SDO93194.1
ATP-binding cassette, subfamily B.
 
     
0.899
SDP35352.1
Putative ABC transport system permease protein.
 
      0.898
SDO38827.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    
 0.894
SDO93163.1
ATP-binding cassette, subfamily B.
 
     
0.893
SDO96807.1
Osmoprotectant transport system permease protein.
 
 0.807
SDP16001.1
ATP-binding cassette, subfamily C, CydC.
 
      0.801
SDO96842.1
Osmoprotectant transport system permease protein.
 
 
 0.800
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.