STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO97706.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (506 aa)    
Predicted Functional Partners:
SDO97644.1
Sorbitol/mannitol transport system permease protein.
 
 0.997
SDO97676.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.996
SDO41901.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.922
SDO87855.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.920
SDO42320.1
Multiple sugar transport system permease protein.
  
 0.807
SDO53699.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.807
SDO87877.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.807
SDP34523.1
Multiple sugar transport system permease protein.
  
 0.807
SDO97617.1
Mannitol 2-dehydrogenase.
 
     0.801
SDP38067.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.736
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.