STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP37108.1Response regulator receiver domain-containing protein. (127 aa)    
Predicted Functional Partners:
SDO20832.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.923
SDO79768.1
Thioredoxin reductase (NADPH).
  
 0.850
SDO88515.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.843
SDP19404.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.843
SDP02574.1
MinD-like ATPase involved in chromosome partitioning or flagellar assembly.
  
 0.813
SDP32583.1
Protein of unknown function.
  
 0.813
SDP37012.1
Carbamoyl-phosphate synthase large subunit.
 
     0.813
SDP36985.1
N-acetylglucosaminyl deacetylase, LmbE family.
 
     0.786
SDP37032.1
Putative hydrolase.
       0.779
SDP37059.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
    0.775
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.