STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP37857.1Leucyl aminopeptidase; Belongs to the peptidase M17 family. (470 aa)    
Predicted Functional Partners:
SDO30366.1
Cystathionine beta-synthase.
    
 0.810
SDP49099.1
Aminopeptidase N.
   
 0.753
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.724
SDO95604.1
Cysteine synthase A.
    
 0.720
SDO93805.1
N-succinyldiaminopimelate aminotransferase.
   
  0.710
SDO85064.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
  0.672
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
  
  0.642
SDO40964.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
  
  0.637
SDO85195.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
  0.637
SDO46456.1
Aspartate/methionine/tyrosine aminotransferase.
   
  0.616
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.