STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP39866.1Signal transduction histidine kinase. (384 aa)    
Predicted Functional Partners:
SDP39884.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  0.973
SDO55667.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  0.883
SDP34354.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.873
SDO58555.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.871
SDO71954.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.871
SDO72840.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.871
SDO70607.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.863
SDO71764.1
Two component transcriptional regulator, LuxR family.
 
  0.860
SDP00082.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.849
SDO99679.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.847
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.