STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP42774.12-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase. (274 aa)    
Predicted Functional Partners:
SDO33063.1
3-hydroxyacyl-CoA dehydrogenase.
 0.988
SDO91575.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.985
SDO79768.1
Thioredoxin reductase (NADPH).
    
 0.818
SDO91618.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
 0.813
SDO93063.1
enoyl-CoA hydratase.
  
0.807
SDP17175.1
3-hydroxyacyl-CoA dehydrogenase.
 
0.805
SDO91757.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
  0.802
SDO91656.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
 
  0.797
SDO91692.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
 
  0.793
rpsI
SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
    
   0.793
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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