STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP44211.1[acyl-carrier-protein] S-malonyltransferase; Manually curated. (304 aa)    
Predicted Functional Partners:
SDO41266.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
 
 
 0.999
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
 0.999
SDP44295.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 0.999
SDP44241.1
3-oxoacyl-[acyl-carrier-protein] synthase-3; Belongs to the thiolase-like superfamily. FabH family.
 
 
 0.997
SDP40180.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
 
 
 0.983
SDP41207.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
 
 
 0.975
rpsP
Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
   0.947
SDO19994.1
Biotin carboxyl carrier protein /biotin carboxylase.
 
 
 0.910
rpsF
Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
 
 0.905
SDP05223.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
 
 
 0.903
Your Current Organism:
Nakamurella panacisegetis
NCBI taxonomy Id: 1090615
Other names: CECT 7604, DSM 26919, KCTC 19426, N. panacisegetis, Nakamurella panacisegetis Kim et al. 2012, Nakamurella sp. P4-7, strain P4-7
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