STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCE21712.1Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (391 aa)    
Predicted Functional Partners:
helA
Protein helA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.973
CCE21711.1
Homologs of previously reported genes of unknown function.
 
   0.944
CCE21714.1
Homologs of previously reported genes of unknown function.
 
     0.900
CCE24068.1
RND efflux transporter, HME family, translocase subunit; Function of strongly homologous gene; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.819
cusA
Cation efflux system protein CusA; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.794
acrB
Acriflavine resistance protein B; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
   0.727
CCE24027.1
Putative Efflux transporter, RND family, MFP subunit, AcrA/E family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.631
CCE23833.1
RND efflux transporter, MFP subunit; Function of strongly homologous gene; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.629
CCE22558.1
Uncharacterized transporter HI_0895; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   0.624
CCE24095.1
RND transporter, HAE1/HME family, permease protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   0.591
Your Current Organism:
Methylomicrobium alcaliphilum
NCBI taxonomy Id: 1091494
Other names: M. alcaliphilum 20Z, Methylomicrobium alcaliphilum 20Z, Methylomicrobium alcaliphilum str. 20Z, Methylomicrobium alcaliphilum strain 20Z
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.