Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCE22258.1 | CCE22259.1 | MEALZ_0563 | MEALZ_0564 | Molybdopterin binding domain protein; Belongs to the CinA family. | Auxin Efflux Carrier. | 0.814 |
CCE22258.1 | pyrF | MEALZ_0563 | MEALZ_0565 | Molybdopterin binding domain protein; Belongs to the CinA family. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.563 |
CCE22258.1 | uup | MEALZ_0563 | MEALZ_0562 | Molybdopterin binding domain protein; Belongs to the CinA family. | ABC transporter ATP-binding protein Uup; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.804 |
CCE22259.1 | CCE22258.1 | MEALZ_0564 | MEALZ_0563 | Auxin Efflux Carrier. | Molybdopterin binding domain protein; Belongs to the CinA family. | 0.814 |
CCE22259.1 | CCE22930.1 | MEALZ_0564 | MEALZ_1240 | Auxin Efflux Carrier. | Homologs of previously reported genes of unknown function. | 0.429 |
CCE22259.1 | pyrF | MEALZ_0564 | MEALZ_0565 | Auxin Efflux Carrier. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.606 |
CCE22259.1 | sfcA | MEALZ_0564 | MEALZ_1122 | Auxin Efflux Carrier. | NAD-dependent malic enzyme. | 0.859 |
CCE22259.1 | uup | MEALZ_0564 | MEALZ_0562 | Auxin Efflux Carrier. | ABC transporter ATP-binding protein Uup; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.798 |
CCE22930.1 | CCE22259.1 | MEALZ_1240 | MEALZ_0564 | Homologs of previously reported genes of unknown function. | Auxin Efflux Carrier. | 0.429 |
pyrF | CCE22258.1 | MEALZ_0565 | MEALZ_0563 | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | Molybdopterin binding domain protein; Belongs to the CinA family. | 0.563 |
pyrF | CCE22259.1 | MEALZ_0565 | MEALZ_0564 | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | Auxin Efflux Carrier. | 0.606 |
pyrF | uup | MEALZ_0565 | MEALZ_0562 | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | ABC transporter ATP-binding protein Uup; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.567 |
sfcA | CCE22259.1 | MEALZ_1122 | MEALZ_0564 | NAD-dependent malic enzyme. | Auxin Efflux Carrier. | 0.859 |
uup | CCE22258.1 | MEALZ_0562 | MEALZ_0563 | ABC transporter ATP-binding protein Uup; Function of homologous gene experimentally demonstrated in an other organism; transporter. | Molybdopterin binding domain protein; Belongs to the CinA family. | 0.804 |
uup | CCE22259.1 | MEALZ_0562 | MEALZ_0564 | ABC transporter ATP-binding protein Uup; Function of homologous gene experimentally demonstrated in an other organism; transporter. | Auxin Efflux Carrier. | 0.798 |
uup | pyrF | MEALZ_0562 | MEALZ_0565 | ABC transporter ATP-binding protein Uup; Function of homologous gene experimentally demonstrated in an other organism; transporter. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.567 |