STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCE22335.1Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (153 aa)    
Predicted Functional Partners:
CCE22336.1
ABC transporter, permease protein; Function of strongly homologous gene; transporter.
 
 0.998
CCE22337.1
ABC transporter, ATPase subunit; Function of strongly homologous gene; transporter.
 
 0.998
CCE24868.1
Homologs of previously reported genes of unknown function.
 
 0.984
CCE25478.1
Homologs of previously reported genes of unknown function.
 
 0.984
CCE25131.1
Toluene tolerance family protein.
 
 0.983
CCE21815.1
Conserved hypothetical protein, putative ABC transporter; Homologs of previously reported genes of unknown function.
 
 0.981
CCE22334.1
Anti-sigma-factor antagonist.
  
 0.979
CCE25477.1
Uncharacterized ABC transporter ATP-binding protein HI_1087.
 
 0.978
CCE24759.1
Hopanoid biosynthesis associated membrane protein HpnM.
 
 0.971
CCE21816.1
Putative ABC-type transport system, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.967
Your Current Organism:
Methylomicrobium alcaliphilum
NCBI taxonomy Id: 1091494
Other names: M. alcaliphilum 20Z, Methylomicrobium alcaliphilum 20Z, Methylomicrobium alcaliphilum str. 20Z, Methylomicrobium alcaliphilum strain 20Z
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