STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO16528.1Putative permease YjgP/YjgQ family protein. (362 aa)    
Predicted Functional Partners:
CEO16953.1
Putative permease YjgP/YjgQ family protein.
 
 0.999
lptB
Lipopolysaccharide export system ATP-binding protein LptB.
   
 0.999
lptD
LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
  
 0.729
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
    0.671
CEO17709.1
Anaerobic benzoate catabolism transcriptional regulator.
 
     0.641
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
     0.640
CEO17456.1
O-Antigen ligase.
 
     0.594
CEO17626.1
PD-(D/E)XK nuclease superfamily protein.
 
     0.586
mreC
Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
 
 0.563
CEO16952.1
DNA polymerase III subunit chi.
 
     0.563
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.