STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywqFUDP-glucose 6-dehydrogenase YwqF. (434 aa)    
Predicted Functional Partners:
capD
UDP-glucose 4-epimerase.
    
 0.939
wfgD
UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD.
  
  
 0.914
pcrA
ATP-dependent DNA helicase PcrA.
  
 
 0.856
kanE
Alpha-D-kanosaminyltransferase.
 
  
 0.745
pglA
N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase.
  
  
 0.679
rfbM
Mannose-1-phosphate guanylyltransferase RfbM.
 
  
 0.602
pta
Phosphate acetyltransferase.
  
  
 0.556
algC
Phosphomannomutase/phosphoglucomutase.
  
  
 0.556
wbpI
UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.536
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
     
 0.520
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.