STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
virB4_1Type IV secretion system protein virB4. (810 aa)    
Predicted Functional Partners:
CEO16718.1
Type IV secretory pathway, VirB3-like protein.
 
 
 0.983
virB8_1
Type IV secretion system protein VirB8.
 
 
 0.971
CEO17946.1
Type IV secretion system protein virB10.
 
  
 0.940
virB4_2
Type IV secretion system protein virB4.
  
  
 
0.927
virB9_1
Type IV secretion system protein virB9 precursor.
 
  
 0.927
virB9_2
Type IV secretion system protein virB9 precursor.
 
  
 0.927
CEO16724.1
Type IV secretion system protein VirB6.
 
  
 0.910
CEO16722.1
Type IV secretion system protein VirB6.
 
  
 0.908
CEO16723.1
Type IV secretion system protein VirB6.
 
  
 0.891
CEO17945.1
Type IV secretion system protein VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
 
  
 0.858
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
Server load: low (20%) [HD]