STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiG_1Ubiquinone biosynthesis O-methyltransferase. (554 aa)    
Predicted Functional Partners:
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
   
 
 0.585
ubiF
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase.
   
 
 0.525
CEO17291.1
Hypothetical protein; COQ9.
   
 
 0.524
CEO16614.1
Hypothetical protein.
       0.517
pagN
Outer membrane protein PagN precursor.
       0.517
wfgD
UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD.
 
   
 0.509
ubiB
Putative protein kinase UbiB.
  
 
 0.509
CEO16607.1
Hypothetical protein; Split gene in original assembly 785 790.
 
    0.479
coq7
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Belongs to the COQ7 family.
   
 
 0.458
higA-2
Antitoxin igA-2.
       0.452
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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