STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dps2DNA protection during starvation protein 2; Belongs to the Dps family. (142 aa)    
Predicted Functional Partners:
tsaA
Putative peroxiredoxin.
  
  
 0.812
CEO17893.1
Hypothetical protein.
  
  
 0.701
CEO17739.1
Ribosome-associated factor Y.
  
    0.684
higA-2
Antitoxin igA-2.
   
    0.601
sodB
Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.594
lpd
Dihydrolipoyl dehydrogenase.
     
 0.503
trxA
Thioredoxin-1; Belongs to the thioredoxin family.
   
  
 0.501
atpH
ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
    0.480
CEO16690.1
BolA-like protein; Belongs to the BolA/IbaG family.
   
    0.404
CEO17186.1
Transcriptional regulator BolA; Belongs to the BolA/IbaG family.
   
    0.404
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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