STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO16721.1Type IV secretion system protein VirB6. (660 aa)    
Predicted Functional Partners:
virB4_2
Type IV secretion system protein virB4.
  
  
 0.858
CEO16718.1
Type IV secretory pathway, VirB3-like protein.
  
  
 0.817
CEO16722.1
Type IV secretion system protein VirB6.
     
 0.803
CEO16720.1
Type IV secretion system protein VirB6.
     
0.782
virB9_2
Type IV secretion system protein virB9 precursor.
  
 
 0.755
virB8_1
Type IV secretion system protein VirB8.
  
  
 0.704
CEO17946.1
Type IV secretion system protein virB10.
  
  
 0.684
virB9_1
Type IV secretion system protein virB9 precursor.
  
 
 0.684
virB4_1
Type IV secretion system protein virB4.
  
  
 0.675
CEO17945.1
Type IV secretion system protein VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
  
  
 0.622
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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