STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptaPhosphate acetyltransferase. (123 aa)    
Predicted Functional Partners:
fadB
Fatty acid oxidation complex subunit alpha.
  
 0.974
acoB
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
  
 0.928
phbC_2
Poly-beta-hydroxybutyrate polymerase, C-terminal domain only.
 
  
 0.902
phbC_1
Poly-beta-hydroxybutyrate polymerase, N-terminal domain only.
 
  
 0.901
aas
Bifunctional protein Aas.
  
  
 0.901
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.896
phbA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.894
degP1
Putative periplasmic serine endoprotease DegP-like precursor.
   
  0.767
CEO16981.1
Hypothetical protein.
   
  0.767
htrB
Serine protease Do-like HtrB.
   
  0.767
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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