STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO16847.1ABC-2 type transporter. (258 aa)    
Predicted Functional Partners:
tagH
Teichoic acids export ATP-binding protein TagH.
 
 0.999
CEO17862.1
Hypothetical protein.
  
  
 0.927
wfgD
UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD.
 
  
 0.894
gltB
Glutamate synthase [NADPH] small chain.
     
 0.775
trxA
Thioredoxin-1; Belongs to the thioredoxin family.
       0.767
pcrA
ATP-dependent DNA helicase PcrA.
     
 0.588
epsE
Putative glycosyltransferase EpsE.
 
  
 0.578
nrdB
Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
  
    0.475
artQ
Arginine transport system permease protein ArtQ.
   
  0.456
CEO17456.1
O-Antigen ligase.
  
  
 0.451
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.