STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO16888.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
CEO17048.1
Stringent starvation protein B.
  
   
 0.764
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.735
CEO16969.1
Hypothetical protein; Belongs to the UPF0335 family.
  
   
 0.726
lysS
Lysine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.701
CEO17709.1
Anaerobic benzoate catabolism transcriptional regulator.
  
     0.643
pntB
NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.
       0.604
CEO16693.1
Bacterial SH3 domain protein.
  
     0.603
bamD
Outer membrane protein assembly factor BamD precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.570
rnd_2
Ribonuclease D.
  
     0.528
gstB
Glutathione S-transferase GST-6.0.
  
     0.504
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.