STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO16969.1Hypothetical protein; Belongs to the UPF0335 family. (78 aa)    
Predicted Functional Partners:
CEO17048.1
Stringent starvation protein B.
  
   
 0.777
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.765
CEO16693.1
Bacterial SH3 domain protein.
  
     0.741
CEO16888.1
Hypothetical protein.
  
   
 0.726
gstB
Glutathione S-transferase GST-6.0.
  
     0.703
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
     0.697
addA
ATP-dependent helicase/nuclease subunit A.
  
     0.626
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.554
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.537
CEO17626.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.512
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.