STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO17025.1Hypothetical protein. (372 aa)    
Predicted Functional Partners:
CEO17626.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.756
lptD
LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
     0.750
CEO16556.1
Hypothetical protein.
  
     0.745
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
   0.725
CEO17692.1
Hypothetical protein.
  
     0.723
CEO16928.1
Hypothetical protein.
  
   
 0.721
CEO17154.1
Hypothetical protein.
 
    0.721
CEO16723.1
Type IV secretion system protein VirB6.
  
     0.707
CEO16607.1
Hypothetical protein; Split gene in original assembly 785 790.
  
     0.706
CEO16722.1
Type IV secretion system protein VirB6.
  
     0.706
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.